Timeline



2006-12-14:

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19:47 Changeset [721] by rjrw
Compare rate data with UDFA database if flag is set in …
19:38 Changeset [720] by rjrw
Parsing and verifying against UDFA database for reactions with #define …
18:57 Changeset [719] by rjrw
Add the udfa chemical data rates.
15:42 Changeset [718] by rjrw
Sort reactant list for clarity in output; sort function will be useful …
09:07 Changeset [717] by rjrw
Switch of H2* entirely if hack applied Sort molecule list (and …

2006-12-13:

22:07 Changeset [716] by rjrw
Include option to plot pbm sparseness pattern for CO network -- at the …
17:15 Changeset [715] by Gary J. Ferland
Set new date.
17:07 Changeset [714] by Gary J. Ferland
parse_compile.cpp - two commands, compile stars and compile grains, …
17:07 Changeset [713] by Gary J. Ferland
these are small changes to improve formatting, remove unnecessary …
07:49 Changeset [712] by rjrw
Move to generic trapped MALLOC Eliminate some globals from the CO …
00:11 Changeset [711] by rjrw
Eliminated BadMalloc? now MALLOC dies rather than returning on failure.

2006-12-12:

22:15 Changeset [710] by rjrw
Merged in small changes from newmole r704:708
22:07 Changeset [709] by rjrw
Make sure malloc and calloc are caught when NDEBUG is set -- memory …
21:44 Changeset [708] by rjrw
Merged changes r691:707 from mainline Small modifications to …
02:40 Changeset [707] by peter
source/cddefines.h: Corrected comment.
02:18 Changeset [706] by peter
source/cddefines.h: - Modify condition for using standard malloc and …

2006-12-09:

12:52 Changeset [705] by Gary J. Ferland
0.05 decrease in column density of H3+. this had been true of newmole …

2006-12-08:

23:22 Changeset [704] by peter
Merging newmole branch to the mainline.
22:33 Changeset [703] by peter
source/parse_drive.cpp: Replaced with copy from mainline. Same …
15:59 Changeset [702] by peter
source/input.cpp: This file was previously added to newmole branch …
15:43 Changeset [701] by peter
Merge changes from mainline upto r700.
11:58 Changeset [700] by Gary J. Ferland
passes vs, pgcc, sdx, some purify slow sims run cleanly
11:58 Changeset [699] by Gary J. Ferland
oversight - this sim had not been updated in previous commit
02:52 Changeset [698] by Gary J. Ferland
add pragma to disable warning due to unused var in vs2005

2006-12-07:

23:44 Changeset [697] by Gary J. Ferland
these are the changes in the slow test suite that resulted from the …
23:27 Changeset [696] by peter
Merged fix in r695 from mainline.
23:24 Changeset [695] by peter
source/cdinit.cpp: Remove duplicate prototype definitions.
22:28 Changeset [694] by rjrw
Fix further vs2005 type warning…
21:18 Changeset [693] by rjrw
Catch MALLOC failures.
21:08 Changeset [692] by Gary J. Ferland
merge changes in mainline between r688 and 691
20:55 Changeset [691] by Gary J. Ferland
these are various small changes that have occurred, also Ryan Porter's …
20:46 Changeset [690] by rjrw
Eliminate ipR_xxx variables. The reaction list now has adaptive length.
19:08 Changeset [689] by rjrw
Switches off grain mantle species when not needed. Privatization of …

2006-12-06:

03:53 Changeset [688] by peter
Merge changes from mainline upto r685 (second installment). Mop up a …
03:35 Changeset [687] by peter
Merge changes from mainline upto r685. This branch is now fully …
03:33 Changeset [686] by Gary J. Ferland
hash.cpp - remove cases of return after call to cdEXIT - cdEXIT does …
00:14 Changeset [685] by Gary J. Ferland
dayslow_master.pl - use icl rather than gcc for slow test suite …

2006-12-05:

19:55 Changeset [684] by rjrw
Patch back to deal with SEGVs on previous step. Still need to a) …
19:53 Changeset [683] by peter
tsuite/auto/run_parallel.pl: Fix some problems in the script: - …
19:33 Changeset [682] by peter
source/atmdat_adfa.cpp: Promote ADfA.CF to double precision.
17:17 Changeset [681] by peter
The main purpose of this commit is to split off the atomic data from …
08:05 Changeset [680] by rjrw
Switch off grain mantle species entirely when NO GRAIN MOLECULES.

2006-12-04:

23:21 Changeset [679] by rjrw
Small tidyings to restrict scope of some more parts of the CO network.
18:51 Changeset [678] by rjrw
Last change might break everything else, though, so roll back the use …
18:32 Changeset [677] by rjrw
Fix limit_eden.in problem. The coupling of the molecular solver to …
03:28 Changeset [676] by Gary J. Ferland
helike_level.cpp - bugfix - trace threw fpe in limit_eden.in in print …
00:03 Changeset [675] by rjrw
Correct bug in UMISTrates hack. Also regularize tabbing in hash.cpp, …

2006-12-03:

05:13 Changeset [674] by peter
source/cont_gaunt.cpp: Remove three more places where z.real() was …
03:35 Changeset [673] by peter
source/grains_mie.cpp: source/cont_gaunt.cpp: source/thirdparty.cpp: …
01:47 Changeset [672] by peter
source/cddefines.h: source/grains_mie.cpp: source/cont_gaunt.cpp: …

2006-12-02:

12:51 Changeset [671] by Gary J. Ferland
no botches but these three were fairly close. test suite run cleanly
03:31 Changeset [670] by Gary J. Ferland
parse_commands.cpp - updated line intensities asserted in smoke test - …
03:27 Changeset [669] by Gary J. Ferland
futher update of sims that changed due to Badnell DR

2006-12-01:

17:04 Changeset [668] by peter
tsuite/auto/stars_optimize1.in: tsuite/auto/stars_optimize2.in: …
03:18 Changeset [667] by Gary J. Ferland
continue updating changed results as consequence of using Badnell DR rates

2006-11-30:

23:44 Changeset [666] by rjrw
Change implementation of POW2/POW3 Tidy up some warning messages.
22:56 Changeset [665] by rjrw
Mop up a few more warnings which cascaded from the last fix…
22:54 Changeset [664] by Gary J. Ferland
remove redundant header files in hash.cpp
22:48 Changeset [663] by Gary J. Ferland
merge of r662 from newmole, ambiguous overload
22:34 Changeset [662] by Gary J. Ferland
vs2003 complained of ambiguous overload in two places, will also more …
20:16 Changeset [661] by rjrw
Catch more (but not all) VS warnings.
19:43 Changeset [660] by rjrw
Fix purify bug.
19:10 Changeset [659] by rjrw
Tidy up remaining bugs and almost all VS warnings in the mainline …
17:46 Changeset [658] by Gary J. Ferland
merge change in logic for adding ice formation on grains - do this …
17:24 Changeset [657] by Gary J. Ferland
merge revisions between head and 645 inclusive
16:56 Changeset [656] by Gary J. Ferland
head_punch.cpp - BUGFIX - fractional heating was evaluated as a double …
12:30 Changeset [655] by Gary J. Ferland
updating predicted results after Badnell DR enabled
03:33 Changeset [654] by Gary J. Ferland
dynamics.cpp - comment within comment fixed *.in - further updates of …
00:24 Changeset [653] by Gary J. Ferland
these are the changed input scripts, due to the use of Badnell DR …
00:23 Changeset [652] by Gary J. Ferland
the big change below is enabling the Badnell DR rates. a good …

2006-11-29:

22:52 Changeset [651] by rjrw
COmole_rate[], ipR_ now only accessed in mole_h_step.cpp and …
22:12 Changeset [650] by rjrw
Re-checked diffs with trunk; merged changes so should now agree at r649.
18:07 Changeset [649] by rjrw
Use NULL rather than 'dummy' for string argument that shouldn't be …
12:10 Changeset [648] by peter
source/punch_do.cpp: source/dynamics.h: source/hash.cpp: …
07:33 Changeset [647] by rjrw
Updated comments to describe current process for addition of CO …
03:19 Changeset [646] by Gary J. Ferland
cddrive.cpp give units of column density for comment for cdColm …
01:59 Changeset [645] by Gary J. Ferland
forgot to add punch_colden.cpp to handle some option on punch column …
01:53 Changeset [644] by Gary J. Ferland
add terminal option to punch wind command add some option to punch …
00:33 Changeset [643] by Gary J. Ferland
commit the renames in the UTA data files that were done in r 635 - 638

2006-11-28:

23:25 Changeset [642] by rjrw
Merge with trunk changes r565:638

2006-11-27:

23:11 Changeset [641] by rjrw
Largs scale deletion of old rate treatment methods. Comments have …
22:35 Changeset [640] by rjrw
All reactions not converted, start to remove old coding.
20:08 Changeset [639] by rjrw
Split off and generalize Leiden C,CRPHOT=>C+,e- rate.
12:28 Changeset [638] by Gary J. Ferland
atmdat_readin.cpp - add comment with data saying that changed from …
00:52 Changeset [637] by rjrw
Only 17 reactions remain to convert…

2006-11-26:

21:47 Changeset [636] by Gary J. Ferland
updated Fe UTA to Gu et al. 2006 ionbal.h add global variable …
13:57 Changeset [635] by Gary J. Ferland
cannot rename within svn while prevoius commit/rename is pending. …
01:48 Changeset [634] by Gary J. Ferland
cddefines.h - add directives for PCLint rm compiling.txt - info is …

2006-11-25:

15:10 Changeset [633] by Gary J. Ferland
move evaluation of badnell dielectronic and radiative recombination …

2006-11-24:

23:25 Changeset [632] by rjrw
Convert lgLeiden flagged reactions. Moved reaction definition after …
23:21 Changeset [631] by Gary J. Ferland
orion_hii_pdr.in - very weak co lines differ by about 20% between …
20:02 Changeset [630] by Gary J. Ferland
punch_do.cpp - corrections to comments
14:09 Changeset [629] by Gary J. Ferland
zero.cpp - turn on Badnell radiative recombination by default …
03:20 Changeset [628] by Gary J. Ferland
several files have small changes in comments cont_ipoint.cpp, …

2006-11-23:

22:04 Changeset [627] by peter
source/grains_mie.cpp: source/cddefines.h: …
19:25 Changeset [626] by rjrw
Convert some more reaction rates to data driven format.
16:39 Changeset [625] by Gary J. Ferland
readme_doxygen.txt - explain use of doxygen better Doxyfile - point to …
14:44 Changeset [624] by Gary J. Ferland
ion_solver.cpp - bring back RJRW code for other methods of solving …
00:06 Changeset [623] by rjrw
Eliminated NUM_ELEMENTS -- element list now has free ordering, …

2006-11-22:

15:46 Changeset [622] by Gary J. Ferland
update comments in several files prt.h, zerologic.cpp, …
15:18 Changeset [621] by peter
tsuite/auto/clean_tsuite.pl: new script to clean out the test suite …
04:57 Changeset [620] by peter
source/grains_qheat.cpp: - Fix compiler warning. source/grains.cpp: …
04:31 Changeset [619] by peter
Merging changes from mainline upto r618.
04:17 Changeset [618] by peter
Merging changes from mainline upto r617.
01:01 Changeset [617] by rjrw
Arbitary number/order of species completed (apart from resulting …

2006-11-21:

21:42 Changeset [616] by rjrw
Factored logic out of a loop in GrainTemperature? for a small but …
10:41 Changeset [615] by rjrw
Change COmole to array of pointers to make species numbers adjustable …

2006-11-20:

23:53 Changeset [614] by rjrw
Eliminate explicit species code numbers entirely. Still need to …
23:09 Changeset [613] by Gary J. Ferland
nightly_copy_files_original.pl, nightly_copy_source.pl - change *.c to …
20:15 Changeset [612] by rjrw
Patches to get clean c++ compile. Elimination of num_heavy_molec variable.

2006-11-19:

23:12 Changeset [611] by peter
source/punch_fits.cpp: source/h2.h: source/state.h: …
19:20 Changeset [610] by peter
source/cddefines.cpp: source/mole_co_etc.cpp: source/elementnames.h: …
17:42 Changeset [609] by peter
Move the code to C++ - global rename *.c -> *.cpp
17:36 Changeset [608] by peter
Merging changes from mainline upto global rename.
17:34 Changeset [607] by peter
Move the code to C++ - global rename *.c -> *.cpp
17:27 Changeset [606] by peter
Move the code to C++ - global rename *.c -> *.cpp
17:20 Changeset [605] by peter
Merging changes from mainline upto global rename.
17:12 Changeset [604] by peter
Move the code to C++ - global rename *.c -> *.cpp

2006-11-18:

19:03 Changeset [603] by Gary J. Ferland
pass all lexington compilers / machines
18:31 Changeset [602] by Gary J. Ferland
parse_commands.c - change asserted value of [OIII] 5007 for the smoke …
16:03 Changeset [601] by peter
source/stars.c: Rename val -> pval to prevent hiding variable in …
14:58 Changeset [600] by Gary J. Ferland
a series of trivial changes correcting minor comments by the intel …

2006-11-16:

23:05 Changeset [599] by rjrw
Molecule codes are now local to mole_co_etc.c Now need to eliminate …

2006-11-15:

22:05 Changeset [598] by rjrw
Move species codes and array sizes to mole_co_priv.h, a step towards …

2006-11-14:

22:21 Changeset [597] by Gary J. Ferland
two changed file to compile as C++ cddefines.c - do not have second …
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